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Tumor Biology
Dr. Isabelle Berquin

Isabelle M. Berquin, PhD

Assistant Professor of Pathology (Tumor Biology); Cancer Biology
Tel: (336) 713-5161
Fax: (336) 716-6757
iberquin@wfubmc.edu

Education:
  • Undergraduate: Free University of Brussels, Belgium; BS in Zoology (Molecular Biology) 1989
  • Postgraduate: Wayne State University; PhD in Cancer Biology, 1996; Training at the Edward A. Smucker Memorial Workshop on Histopathobiology of Neoplasia; Keystone, Colorado, 1993
  • Fellowships: University of Michigan: Department of Radiation Oncology, 1997-2001; Institute of Gerontology, 1996-97  
Interests:
  • Teaching: Cancer Biology, Breast Cancer, Molecular Biology
  • Research: Molecular Pathogenesis of Breast Cancer, Regulation of Gene Expression, Signal Transduction, Proteases in Cancer
Current Research: 

Only a subset of breast cancer patients will require chemotherapy for long-term management of the disease. Unfortunately, the parameters that determine the malignancy of tumor cells are not well understood. Overexpression of the epidermal growth factor receptor (EGFR) occurs in 20-30% of breast tumors and is an indicator of poor prognosis, but the mechanism of overexpression is unclear, as the EGFR gene is rarely amplified in breast cancer. The acquisition of growth factor independence of human mammary epithelial (HME) cells in vitro correlates with increasing tumor aggressiveness in vivo.

To explore the relationship between EGF independence and overexpression of the EGFR, the Ethier lab at the University of Michigan developed an expression cloning strategy aimed at the functional identification of genes that mediate growth factor autonomy in human breast cancer cells (Figure 1). Using this approach, we have demonstrated that the EGFR ligand amphiregulin acts in an autocrine fashion through the EGFR in the donor breast cancer cell line SUM-149PT and confers EGF independence to HME cells. We isolated a second cDNA candidate in a similar screening experiment, which corresponded to NSEP1/YB-1 (Nuclease-sensitive element-binding protein 1/Y-box binding protein 1), a multifunctional regulator of gene transcription and translation. We found that NSEP1 expression in human mammary epithelial cells is sufficient to confer EGF autonomy in vitro, in an EGFR-dependent fashion.

Interestingly, NSEP1 was recently shown to be elevated in breast cancer and to have prognostic value. The current focus of my laboratory is to delineate the functional relationship between NSEP1 and EGFR in HME and breast cancer cells, and to determine if NSEP1 contributes to tumor development. In addition, the prognostic significance of NSEP1 co-expression with EGFR and other markers is being investigated.

 Expression cloning strategy

Figure Legend: Expression cloning strategy. A cDNA expression library is constructed with mRNA from breast cancer cells that overexpress EGFR and are EGF-independent for growth in serum-free medium. As a vector, we use the pBMN plasmid, which yields high retroviral titers when transfected into FNX-Ampho packaging cells. The resulting retroviral library is harvested from the culture medium and used to infect EGF-dependent HME cells. Infected cells are selected for several weeks in serum-free, EGF-free medium. Under these conditions, control HME cells fail to proliferate. EGF-independent colonies are isolated, from which library inserts are rescued either by PCR or by biological rescue with MMLV. The role of the rescued cDNAs in EGF independence is verified by transducing them into HME cells and determining if they form EGF independent clones at increased frequency.
Recent Publications:

Chen YQ, Edwards IJ, Kridel SJ, Thornburg T, Berquin IM. Dietary fat-gene interactions in cancer. Cancer Metastasis Rev. 2007 Dec;26(3-4):535-51

Berquin IM, Min Y, Wu R, Wu J, Perry D, Cline JM, Thomas MJ, Thornburg T, Kulik G, Smith A, Edwards IJ, D'Agostino R, Zhang H, Wu H, Kang JX, Chen YQ. Modulation of prostate cancer genetic risk by omega-3 and omega-6 fatty acids. J Clin Invest. 2007 Jul;117(7):1866-75.

Chen YQ, Berquin IM, Daniel LW, Edwards IJ, O'Flaherty JT, Thomas MJ, Tooze JA, Wykle B. Omega-3 fatty acids and cancer risk. JAMA. 2006 Jul 19;296(3):282; author reply 282.

Wu J, Lee C, Yokom D, Jiang H, Cheang MC, Yorida E, Turbin D, Berquin IM, Mertens PR, Iftner T, Gilks CB, Dunn SE. Disruption of the Y-box binding protein-1 results in suppression of the epidermal growth factor receptor and HER-2. Cancer Res. 2006 May 1;66(9):4872-9.

Berquin IM, Min Y, Wu R, Wu H, Chen YQ. Expression signature of the mouse prostate. J Biol Chem. 2005 Oct 28;280(43):36442-51.

Sun H, Berquin IM, Edwards IJ. Omega-3 polyunsaturated fatty acids regulate syndecan-1 expression in human breast cancer cells. Cancer Res. 2005 May 15;65(10):4442-7.

Berquin IM, Pang B, Dziubinski ML, Scott, LM, Chen YQ, Nolan GP, Ethier SP. Y-box binding protein 1 confers EGF independence to human mammary epithelial cells. Oncogene. 2005 Apr 28;24(19):3177-86.

Edwards IJ, Berquin IM, Sun H, O' Flaherty JT, Daniel LW, Thomas MJ, Rudel LL, Wykle RL, Chen YQ. Differential effects of delivery of n-3 fatty acids to human cancer cells by low density lipoproteins versus albumin. Clin Cancer Res. 2004 Dec 15;10(24):8275-83.

Feroze-Merzoug F, Berquin IM, Dey J, Chen YQ. Peptidylprolyl isomerase A (PPIA) as a preferred internal control over GAPDH and beta-actin in quantitative RNA analyses. Biotechniques. 2002 Apr;32(4):776-8, 780, 782.

Berquin IM, Dziubinski ML, Nolan GP, Ethier SP. A functional screen for genes inducing epidermal growth factor autonomy of human mammary epithelial cells confirms the role of amphiregulin. Oncogene. 2001 Jul 5;20(30):4019-28.

Yan S, Berquin IM, Troen BR, Sloane BF. Transcription of human cathepsin B is mediated by Sp1 and Ets family factors in glioma. DNA Cell Biol. 2000 Feb;19(2):79-91.

Berquin IM, Yan S, Katiyar K, Huang L, Sloane BF, Troen BR. Differentiating agents regulate cathepsin B gene expression in HL-60 cells. J Leukoc Biol. 1999 Oct;66(4):609-16.

Berquin IM, Ahram M, Sloane BF. Exon 2 of human cathepsin B derives from an Alu element. FEBS Lett. 1997 Dec 8;419(1):121-3.

Berquin IM, Cao L, Fong D, Sloane BF. Identification of two new exons and multiple transcription start points in the 5'-untranslated region of the human cathepsin-B-encoding gene. Gene. 1995 Jul 4;159(2):143-9.

Cao L, Taggart RT, Berquin IM, Moin K, Fong D, Sloane BF. Human gastric adenocarcinoma cathepsin B: isolation and sequencing of full-length cDNAs and polymorphisms of the gene. Gene. 1994 Feb 25;139(2):163-9.